SRX474591
GSM1332704: inp H3K27me3 mixed 1; Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Embryo
Cell type
5-13h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
input_H3K27me3_mixed
tissue
embryo
age
5-13h
tissue subtype
whole embryo

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Nuclei were digested with MNase, solubilized and ChIP performed using the appropriate antibody. Libraries were prepared as described in Bowman et al., 2013.

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
64332911
Reads aligned (%)
93.1
Duplicates removed (%)
55.2
Number of peaks
3540 (qval < 1E-05)

dm3

Number of total reads
64332911
Reads aligned (%)
93.9
Duplicates removed (%)
52.3
Number of peaks
6729 (qval < 1E-05)

Base call quality data from DBCLS SRA