SRX471885
Drosophila melanogaster Late embryo ChIP-seq H3K4me3

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Embryo
Cell type
14-16h embryos
NA
NA

Attributes by original data submitter

Sample

breed
NA
strain
Oregon-R-modENCDOE
age
14-16 hr late embryo
biomaterial_provider
modENCODE - Pirrotta Lab
sex
not determined
tissue
whole embryo
ChIP_target
H3K4me3
SamplePrepID
EL1

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
144867196
Reads aligned (%)
95.2
Duplicates removed (%)
77.5
Number of peaks
10365 (qval < 1E-05)

dm3

Number of total reads
144867196
Reads aligned (%)
95.3
Duplicates removed (%)
76.6
Number of peaks
10390 (qval < 1E-05)

Base call quality data from DBCLS SRA