Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
Pro-B cells
NA
NA

Attributes by original data submitter

Sample

source_name
MPL-WT-Ba/F3_EV_Input
cell line
MPL-WT-Ba/F3
cell type
murine pro B cell line
genotype/variation
expressing Empty vector
chip antibody
none (input)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Lysates were cross-linked in 1% formaldehyde and lysed Librairires were prepared using NEB ChIP-seq Library Preparation Kit

Sequencing Platform

instrument_model
Illumina HiSeq 2500

mm10

Number of total reads
24048249
Reads aligned (%)
97.4
Duplicates removed (%)
13.9
Number of peaks
122 (qval < 1E-05)

mm9

Number of total reads
24048249
Reads aligned (%)
97.2
Duplicates removed (%)
14.6
Number of peaks
118 (qval < 1E-05)

Base call quality data from DBCLS SRA