Antigen

Antigen Class

TFs and others

Antigen

ATRX

Cell type

Cell type Class

Neural

Cell type

CHLA-90

NA

NA

Sample

source_name

Cell Culture

tissue

CHLA90 ATRX in-frame fusion metastatic neuroblastoma

treatment

none (untreated)

chip antibody

ATRX (Abcam, ab97508)

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads

81232060

Reads aligned (%)

91.1

Duplicates removed (%)

12.7

Number of peaks

12205 (qval < 1E-05)

hg19

Number of total reads

81232060

Reads aligned (%)

90.3

Duplicates removed (%)

14.8

Number of peaks

16741 (qval < 1E-05)