Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H2AK119ub

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

source_name
Mouse embryonic stem cells with Drosophila spike-in, untreated control, H2AK119ub1 ChIP-seq
cell line
Pcgf1/3/5/2fl/fl
replicate
3
treatment agent
none
treatment time point
0 hr
clone
H3
spike-in reference organism
Drosophila melanogaster
spike-in cell line
SG4
ChIP
H2AK119ub1
antibody
Cell Signaling Technology(#D27C4 )

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

dm6

Number of total reads
35329600
Reads aligned (%)
1.1
Duplicates removed (%)
2.0
Number of peaks
67 (qval < 1E-05)

dm3

Number of total reads
35329600
Reads aligned (%)
1.5
Duplicates removed (%)
1.6
Number of peaks
124 (qval < 1E-05)

Base call quality data from DBCLS SRA