Curated Sample Data


Genome
dm3
Antigen Class
Input control
Antigen
Input control
Cell type Class
Unclassified
Cell type
Unclassified

Cell type information


NA
NA

Attributes by Original Data Submitter


source_name
Mouse embryonic stem cells with Drosophila spike-in, tamoxifen-treated (72hr), gDNA-seq
cell line
Ring1a-/-;Ring1bfl/fl
replicate
2
treatment agent
tamoxifen (OHT)
treatment time point
72 hr
clone
B9
spike-in reference organism
Drosophila melanogaster
spike-in cell line
SG4
ChIP
none
antibody
none

Metadata from Sequence Read Archive

Library Description


library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Platform Information


instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

External Database Query

Logs in read processing pipeline


Number of total reads
7042745
Reads aligned (%)
4.7
Duplicates removed (%)
2.0
Number of peaks
69 (qval < 1E-05)

Sequence Quality Data from DBCLS SRA