Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Blood
Cell type
TMD8
Primary Tissue
Blood
Tissue Diagnosis
Lymphoma Diffuse Large B Cell

Attributes by original data submitter

Sample

source_name
ABC-DLBCL cell line
cell line
TMD8
cell type
activated B cell-like (ABC) diffuse large B-cell lymphoma (DLBCL) cell line
treatment
Tetracyclin inducible TCF4 expression
chip antibody
none (WCE)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
34230894
Reads aligned (%)
98.0
Duplicates removed (%)
3.2
Number of peaks
853 (qval < 1E-05)

hg19

Number of total reads
34230894
Reads aligned (%)
96.8
Duplicates removed (%)
3.4
Number of peaks
507 (qval < 1E-05)

Base call quality data from DBCLS SRA