Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
GFP

Cell type

Cell type Class
Adult
Cell type
Whole worm
NA
NA

Attributes by original data submitter

Sample

source_name
whole animal
tissue
whole animal
genotype
N2
bacterial exposure
PA14
exposure length
4 hours
age
L4
antibody
Ab290 (ChIP-grade polyclonal antibody from Abcam)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

ce11

Number of total reads
13643898
Reads aligned (%)
91.3
Duplicates removed (%)
63.9
Number of peaks
891 (qval < 1E-05)

ce10

Number of total reads
13643898
Reads aligned (%)
91.3
Duplicates removed (%)
63.9
Number of peaks
891 (qval < 1E-05)

Base call quality data from DBCLS SRA