Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
AR

Cell type

Cell type Class
Prostate
Cell type
Localized prostate
NA
NA

Attributes by original data submitter

Sample

source_name
Patient localized prostate tumor tissue
tissue
localized tumor tissue
chip antibody
AR
chip antibody vendor
Santa Cruz Biotechnology
chromosome
Chr2

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
1549539
Reads aligned (%)
99.7
Duplicates removed (%)
0.0
Number of peaks
1217 (qval < 1E-05)

hg38

Number of total reads
1549539
Reads aligned (%)
99.7
Duplicates removed (%)
0.0
Number of peaks
1213 (qval < 1E-05)

Base call quality data from DBCLS SRA