Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Adult
Cell type
Ovary
NA
NA

Attributes by original data submitter

Sample

strain
w1118
isolate
ovary
breed
Fruit fly
cultivar
not applicable
ecotype
not applicable
age
adult
dev_stage
adult
sex
female
tissue
ovary
treatment
HP1a ChIP
replicate
replicate 2

Sequenced DNA Library

library_name
HP1a_ChIP_2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

dm6

Number of total reads
10451179
Reads aligned (%)
71.3
Duplicates removed (%)
15.3
Number of peaks
3134 (qval < 1E-05)

dm3

Number of total reads
10451179
Reads aligned (%)
73.7
Duplicates removed (%)
11.7
Number of peaks
3034 (qval < 1E-05)

Base call quality data from DBCLS SRA