Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
BRD9

Cell type

Cell type Class
Others
Cell type
Aska
NA
NA

Attributes by original data submitter

Sample

source_name
Aska (SS)
cell line
Aska
chip antibody
Abcam (ab137245)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
45980542
Reads aligned (%)
69.7
Duplicates removed (%)
26.0
Number of peaks
17364 (qval < 1E-05)

hg38

Number of total reads
45980542
Reads aligned (%)
76.8
Duplicates removed (%)
20.3
Number of peaks
16657 (qval < 1E-05)

Base call quality data from DBCLS SRA