Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Larvae
Cell type
Salivary glands
NA
NA

Attributes by original data submitter

Sample

source_name
Salivary Glands
cell type
Salivary Gland Cells
developmental stage
Third instar larvae
strain
JIL-1 -/-

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Lysates were clarified from sonicated nuclei and histone-DNA complexes were isolated with antibody. Libraries were prepared according to Illumina's instructions

Sequencing Platform

instrument_model
Illumina HiSeq 2000

dm6

Number of total reads
20054882
Reads aligned (%)
95.1
Duplicates removed (%)
90.8
Number of peaks
1526 (qval < 1E-05)

dm3

Number of total reads
20054882
Reads aligned (%)
95.4
Duplicates removed (%)
88.7
Number of peaks
2026 (qval < 1E-05)

Base call quality data from DBCLS SRA