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For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For dm3
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For dm6
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: JIL-1
wikigenes
PDBj
CellType: Salivary glands
ATCC
MeSH
RIKEN BRC
SRX450789
GSM1315381: 5C9 2 Sample 2; Drosophila melanogaster; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
JIL-1
Cell type
Cell type Class
Larvae
Cell type
Salivary glands
NA
NA
Attributes by original data submitter
Sample
source_name
Salivary Glands
cell type
Salivary Gland Cells
developmental stage
Third instar larvae
strain
Wild Type
chip antibody
JIL-1 monoclonal antibody 5C9
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Lysates were clarified from sonicated nuclei and histone-DNA complexes were isolated with antibody. Libraries were prepared according to Illumina's instructions
Sequencing Platform
instrument_model
Illumina Genome Analyzer II
Where can I get the processing logs?
Read processing pipeline
log
dm3
Number of total reads
28481385
Reads aligned (%)
19.9
Duplicates removed (%)
65.8
Number of peaks
4309 (qval < 1E-05)
dm6
Number of total reads
28481385
Reads aligned (%)
19.7
Duplicates removed (%)
66.0
Number of peaks
4293 (qval < 1E-05)
Base call quality data from
DBCLS SRA