Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
psq

Cell type

Cell type Class
Cell line
Cell type
Kc167
Source
e/se
Developmental Stage
dorsal closure stage

Attributes by original data submitter

Sample

source_name
Kc167
cell line
Kc167
cell type
Drosophila Embryonic Cell Line
chip-antibody
Psq-BTB (recognizes PsqL)
treatment
under normal conditions

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

dm3

Number of total reads
6039838
Reads aligned (%)
153.6
Duplicates removed (%)
19.3
Number of peaks
2373 (qval < 1E-05)

dm6

Number of total reads
6039838
Reads aligned (%)
148.8
Duplicates removed (%)
21.4
Number of peaks
2178 (qval < 1E-05)

Base call quality data from DBCLS SRA