Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Blood
Cell type
Acute myeloid leukemia
NA
NA

Attributes by original data submitter

Sample

source_name
Bone marrow
time point
initial diagnosis
antibody
H3K27ac (ab4729)
tissue
Bone marrow
disease
acute myeloid leukemia

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
TruSeq DNA sample preparation kit (Illumina)

Sequencing Platform

instrument_model
NextSeq 500

hg38

Number of total reads
24705747
Reads aligned (%)
83.0
Duplicates removed (%)
5.7
Number of peaks
9249 (qval < 1E-05)

hg19

Number of total reads
24705747
Reads aligned (%)
82.6
Duplicates removed (%)
6.3
Number of peaks
9243 (qval < 1E-05)

Base call quality data from DBCLS SRA