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For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: H3K36me3
wikigenes
PDBj
CellType: KOPT-K1
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
SRX448949
GSM1314131: H3K36me3 ChIP-seq in KOPT-K1 persisters; Homo sapiens; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
Histone
Antigen
H3K36me3
Cell type
Cell type Class
Blood
Cell type
KOPT-K1
NA
NA
Attributes by original data submitter
Sample
source_name
KOPT-K1 persister cells
cell line
KOPT-K1
cell type
T-cell acute lymphoblastic leukemia
treated with
1uM gamma Secretase inhibitor over 7wks
chip antibody
H3K36me3
chip antibody vendor
Abcam
Sequenced DNA Library
library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests
Sequencing Platform
instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests
Where can I get the processing logs?
Read processing pipeline
log
hg38
Number of total reads
51318139
Reads aligned (%)
67.8
Duplicates removed (%)
4.3
Number of peaks
2292 (qval < 1E-05)
hg19
Number of total reads
51318139
Reads aligned (%)
67.6
Duplicates removed (%)
4.7
Number of peaks
2333 (qval < 1E-05)
Base call quality data from
DBCLS SRA