Sample information curated by ChIP-Atlas

Antigen

Antigen Class
DNase-seq
Antigen
DNase-Seq

Cell type

Cell type Class
Blood
Cell type
CD34+ cells
NA
NA

Attributes by original data submitter

Sample

source_name
CD34 positive AML cells from peripheral blood
condition
AML

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
31493223
Reads aligned (%)
93.7
Duplicates removed (%)
64.4
Number of peaks
29279 (qval < 1E-05)

hg19

Number of total reads
31493223
Reads aligned (%)
93.4
Duplicates removed (%)
65.3
Number of peaks
29196 (qval < 1E-05)

Base call quality data from DBCLS SRA