SRX4454000
S2 CENPA Input

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Cell line
Cell type
S2-DRSC
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

strain
S2
age
NA
dev_stage
NA
sex
NA
tissue
NA
cell_line
S2-DRSC cells
cell_type
S2-DRSC cells

Sequenced DNA Library

library_name
S2_CENPA_Input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
18109269
Reads aligned (%)
90.8
Duplicates removed (%)
55.8
Number of peaks
2752 (qval < 1E-05)

dm3

Number of total reads
18109269
Reads aligned (%)
92.1
Duplicates removed (%)
54.5
Number of peaks
5292 (qval < 1E-05)

Base call quality data from DBCLS SRA