SRX4453995
OreR CENPA ChIP R1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Embryo
Cell type
Embryos
NA
NA

Attributes by original data submitter

Sample

strain
OreR
age
0-24hr
dev_stage
embryo
sex
mixed
tissue
embryo

Sequenced DNA Library

library_name
OreR_CENPA_ChIP_R1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
43195034
Reads aligned (%)
54.0
Duplicates removed (%)
96.4
Number of peaks
173 (qval < 1E-05)

dm3

Number of total reads
43195034
Reads aligned (%)
54.5
Duplicates removed (%)
96.1
Number of peaks
478 (qval < 1E-05)

Base call quality data from DBCLS SRA