SRX4453991
OreR CENPA ChIP R3

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Embryo
Cell type
Embryos
NA
NA

Attributes by original data submitter

Sample

strain
OreR
age
0-24hr
dev_stage
embryo
sex
mixed
tissue
embryo

Sequenced DNA Library

library_name
OreR_CENPA_ChIP_R3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
31161595
Reads aligned (%)
89.3
Duplicates removed (%)
4.9
Number of peaks
23703 (qval < 1E-05)

dm3

Number of total reads
31161595
Reads aligned (%)
90.5
Duplicates removed (%)
5.0
Number of peaks
23460 (qval < 1E-05)

Base call quality data from DBCLS SRA