Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
hESC derived cardiac cells
NA
NA

Attributes by original data submitter

Sample

source_name
ES derived cardiac mesoderm
tissue
ES derived cardiac mesoderm
differentiation time
day05
genotype
H9 MLC2v:H2B
matched input
N/A
chip antibody
none (input)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
80264125
Reads aligned (%)
98.9
Duplicates removed (%)
7.2
Number of peaks
2108 (qval < 1E-05)

hg19

Number of total reads
80264125
Reads aligned (%)
98.1
Duplicates removed (%)
9.1
Number of peaks
1743 (qval < 1E-05)

Base call quality data from DBCLS SRA