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Install and launch IGV before selecting data to visualize
For ce11
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For ce10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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Analyze
For ce11
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For ce10
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For ce11
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For ce10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: NA
wikigenes
PDBj
CellType: Whole worm
ATCC
MeSH
RIKEN BRC
SRX4344460
daf-2; hlh-30; DAF-16::GFP ChIP-SEQ IP
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
No description
Antigen
NA
Cell type
Cell type Class
Adult
Cell type
Whole worm
NA
NA
Attributes by original data submitter
Sample
replicate
biological replicate 1
strain
RIE531_2
age
Day 1 adult
sex
hermaphrodite
tissue
whole animal
Sequenced DNA Library
library_name
s35_daf2hlh30_DAF16_GFP_CHIP_IP
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina HiSeq 3000
Where can I get the processing logs?
Read processing pipeline
log
ce11
Number of total reads
17561934
Reads aligned (%)
92.0
Duplicates removed (%)
41.9
Number of peaks
1041 (qval < 1E-05)
ce10
Number of total reads
17561934
Reads aligned (%)
92.0
Duplicates removed (%)
41.9
Number of peaks
1043 (qval < 1E-05)
Base call quality data from
DBCLS SRA