Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
AR

Cell type

Cell type Class
Kidney
Cell type
293
Primary Tissue
Kidney
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
Isogenic HEK293 Cells
cell line
Human Embryonal Kidney Cells HEK-293
antibody
rabbit antiserum against AR
treatment
10 nM R1881
treatment time
40 min
genotype/variation
SUMOylation-deficient AR

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
23442707
Reads aligned (%)
92.4
Duplicates removed (%)
6.7
Number of peaks
41753 (qval < 1E-05)

hg38

Number of total reads
23442707
Reads aligned (%)
93.4
Duplicates removed (%)
6.0
Number of peaks
41748 (qval < 1E-05)

Base call quality data from DBCLS SRA