SRX4279688
input [Rhino ChIP] DNA from thoc5[e00906]/thoc5[1]

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
rhi

Cell type

Cell type Class
Adult
Cell type
Ovary
NA
NA

Attributes by original data submitter

Sample

strain
thoc5[e00906]/thoc5[1]
age
2-4 days
sex
female
tissue
ovary
sample_type
input DNA
target
Rhino

Sequenced DNA Library

library_name
input [Rhino ChIP] DNA from thoc5[e00906]/thoc5[1]_rep1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

dm3

Number of total reads
20592334
Reads aligned (%)
107.1
Duplicates removed (%)
28.1
Number of peaks
1428 (qval < 1E-05)

dm6

Number of total reads
20592334
Reads aligned (%)
100.5
Duplicates removed (%)
29.7
Number of peaks
991 (qval < 1E-05)

Base call quality data from DBCLS SRA