Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Stat3

Cell type

Cell type Class
Kidney
Cell type
Kidney
MeSH Description
Body organ that filters blood for the secretion of URINE and that regulates ion concentrations.

Attributes by original data submitter

Sample

source_name
Kidney
strain/background
C57BL/6
genotype/variation
Wap-E12-Ramp3
Stage
Lactation day 10
tissue
Kidney
chip antibody
STAT3 (Santa Cruz, sc-482)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Libraries for sequencing were prepared using standard Illumina protocols.

Sequencing Platform

instrument_model
Illumina HiSeq 2500

mm10

Number of total reads
30236348
Reads aligned (%)
97.9
Duplicates removed (%)
7.9
Number of peaks
5598 (qval < 1E-05)

mm9

Number of total reads
30236348
Reads aligned (%)
97.7
Duplicates removed (%)
8.0
Number of peaks
5590 (qval < 1E-05)

Base call quality data from DBCLS SRA