Antigen

Antigen Class

TFs and others

Antigen

ZFP64

Cell type

Cell type Class

Blood

Cell type

Acute myeloid leukemia

NA

NA

Sample

source_name

acute myeloid leukemia

cell line

NOMO-1

chip antibody

ZFP64(Proteintech Group,17187-1-AP)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Cell lysates were clarified from sonicated nulcei and ZFP64-DNA or histone-DNA complexs were isolated with ZFP64 or histone antibody. Libraries were prepared using Illumina TruSeq ChIP Sample Prep kit following manufacture's protocol. Briefly, ChIP DNA was end-repaired, 3'-adenylated, and then ligated with indexed adaptor. These DNA was size selected (200-400 bp) via agarose gel electrophoresis, and PCR amplified. Final products were purified using AMPure XP beads.

Sequencing Platform

instrument_model

NextSeq 500

hg38

Number of total reads

35984108

Reads aligned (%)

93.8

Duplicates removed (%)

20.7

Number of peaks

6462 (qval < 1E-05)

hg19

Number of total reads

35984108

Reads aligned (%)

93.0

Duplicates removed (%)

22.2

Number of peaks

6337 (qval < 1E-05)