Curated Sample Data


Genome
dm3
Antigen Class
Histone
Antigen
H3K27me3
Cell type Class
Embryo
Cell type
2-4h embryos

Cell type information


NA
NA

Attributes by Original Data Submitter


source_name
2-4 hr old Oregon R embryos
devepmental stage
2-4 hr old embryo
antibodies
H3K27me3 (Cell Signaling (C36B11))

Metadata from Sequence Read Archive

Library Description


library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Lysates were clarified from sonicated nuclei and histone-DNA complexes were isolated with antibody. Libraries were prepared according to Illumina's instructions accompanying the TruSeq kit.

Platform Information


instrument_model
Illumina HiSeq 2500

External Database Query

Logs in read processing pipeline


Number of total reads
18171780
Reads aligned (%)
94.5
Duplicates removed (%)
2.9
Number of peaks
2561 (qval < 1E-05)

Sequence Quality Data from DBCLS SRA