SRX4053365
Drosophila melanogaster yw egg control ChIP seq Input 1 2 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Embryo
Cell type
Embryos
NA
NA

Attributes by original data submitter

Sample

strain
yw
isolate
not applicable
breed
not applicable
cultivar
not applicable
ecotype
not applicable
age
3:45-4:45 h
dev_stage
embryo
sex
pooled male and female
tissue
egg
genotype
wt
sample_type
Input
treatment
control
Replicate no.
1
Run no.
2
file no.
1

Sequenced DNA Library

library_name
Drosophila melanogaster_yw_egg_control_ChIP seq_Input_1_2_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
1667403
Reads aligned (%)
79.7
Duplicates removed (%)
11.1
Number of peaks
258 (qval < 1E-05)

dm3

Number of total reads
1667403
Reads aligned (%)
80.8
Duplicates removed (%)
8.6
Number of peaks
858 (qval < 1E-05)

Base call quality data from DBCLS SRA