Curated Sample Data


Genome
dm3
Antigen Class
Input control
Antigen
Input control
Cell type Class
Embryo
Cell type
7h embryos

Cell type information


NA
NA

Attributes by Original Data Submitter


source_name
Stage 11 embryos
chip antibody
none
genotype
w1118
Stage
stage 11 embryo

Metadata from Sequence Read Archive

Library Description


library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Hand-selected embryos were fixed with 1.8% formaldehyde. Lysates were clarified from sonicated nuclei andTF-DNA complexes isolated with an antibody. Libraries were prepared for sequencing using standard Illumina protocols.

Platform Information


instrument_model
Illumina Genome Analyzer

External Database Query

Logs in read processing pipeline


Number of total reads
8466741
Reads aligned (%)
91.6
Duplicates removed (%)
7.5
Number of peaks
6316 (qval < 1E-05)

Sequence Quality Data from DBCLS SRA