Antigen

Antigen Class

Unclassified

Antigen

Unclassified

Cell type

Cell type Class

Digestive tract

Cell type

ISt-1

NA

NA

Sample

source_name

Gastric Cancer Line

cell line

Ist1

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIP-seq libraries were prepared following manufacturer protocols (New England Biolabs). RNAseq libraries were prepared using Illumina Tru-Seq RNA Sample Preparation v2 protocol, according to the manufacturer's instructions.

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

50800726

Reads aligned (%)

96.1

Duplicates removed (%)

40.6

Number of peaks

122055 (qval < 1E-05)

hg19

Number of total reads

50800726

Reads aligned (%)

95.8

Duplicates removed (%)

40.9

Number of peaks

121564 (qval < 1E-05)