Curated Sample Data


Genome
dm3
Antigen Class
Input control
Antigen
Input control
Cell type Class
Adult
Cell type
Adult head

Cell type information


NA
NA

Attributes by Original Data Submitter


source_name
Tau, Input
age
10 days old
genotype/variation
elav-GAL4/Y;UAS-tauR406W
Sex
male
tissue
whole heads
chip antibody
none
chip antibody vendor
Abcam
molecule subtype
input genomice DNA

Metadata from Sequence Read Archive

Library Description


library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
2 grams of fly heads were ground in liquid nitrogen and DNA was crosslinked to protein with formaldehyde. Chromatin was sheared to 500 bp prior to ChIP Libraries were prepared using the NEBNext ChIP-seq Library Prep Reagent Set for Illumina according to the manufacturer's recommendations

Platform Information


instrument_model
Illumina HiSeq 2000

External Database Query

Logs in read processing pipeline


Number of total reads
7514063
Reads aligned (%)
92.2
Duplicates removed (%)
15.8
Number of peaks
1971 (qval < 1E-05)

Sequence Quality Data from DBCLS SRA