Antigen

Antigen Class

TFs and others

Antigen

TCF7

Cell type

Cell type Class

Breast

Cell type

MCF 10A

Primary Tissue

Breast

Tissue Diagnosis

Fibrocystic Disease

Sample

source_name

TCF7-HA ChIPseq of MCF10DCIScells overexpressing TCF7

treatment

Dox

expression vector

TCF7

subtype

MCF10DCIS-TetTCF7

antibody

TCF7-HA

cell type

MCF10DCIS cells

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

RNeasy Mini Kit for RNA extraction, phenol-chloroform extraction for ChIP DNA Kapa mRNA Hyper Pepe Kit, Rubicon ThruPLEX DNA-seq Kit

Sequencing Platform

instrument_model

Illumina Genome Analyzer

hg38

Number of total reads

28889268

Reads aligned (%)

93.9

Duplicates removed (%)

38.2

Number of peaks

43994 (qval < 1E-05)

hg19

Number of total reads

28889268

Reads aligned (%)

90.8

Duplicates removed (%)

46.5

Number of peaks

43196 (qval < 1E-05)