Antigen

Antigen Class

TFs and others

Antigen

ASUN

Cell type

Cell type Class

Blood

Cell type

Monocytes

MeSH Description

Large, phagocytic mononuclear leukocytes produced in the vertebrate BONE MARROW and released into the BLOOD; contain a large, oval or somewhat indented nucleus surrounded by voluminous cytoplasm and numerous organelles.

Sample

source_name

in vitro differentiated monocytes (from bone marrow CD34+ cells)

chip antibody

Bethyl A303-575A

cell type

bone marrow CD34+ derived monocytes (day5)

infection

shRNA against shLUC

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

NEBNext ChIP-Seq ULTRAII DNA Sample Prep Kit (New England Biolabs, inc.)

Sequencing Platform

instrument_model

NextSeq 500

hg38

Number of total reads

33155559

Reads aligned (%)

92.0

Duplicates removed (%)

9.4

Number of peaks

12738 (qval < 1E-05)

hg19

Number of total reads

33155559

Reads aligned (%)

90.9

Duplicates removed (%)

13.4

Number of peaks

11944 (qval < 1E-05)