Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
LMNA

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

source_name
LMNA knockout cc1170-1AD2
lmna genotype
LMNA null
transgene
No
cell sorting
No sorting
antibody
anti-phospho-Ser22-LMNA (Cell Signaling D2B2E 13448)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
18979529
Reads aligned (%)
22.9
Duplicates removed (%)
69.8
Number of peaks
212 (qval < 1E-05)

hg38

Number of total reads
18979529
Reads aligned (%)
24.1
Duplicates removed (%)
68.6
Number of peaks
166 (qval < 1E-05)

Base call quality data from DBCLS SRA