Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
MED1

Cell type

Cell type Class
Others
Cell type
Mesenchymal stem cells
NA
NA

Attributes by original data submitter

Sample

source_name
BM-hMSC-TERT4 osteAdlast diff 14d
cell line
BM-hMSC-TERT4
differentiation status
adipocyte
timepoint
14d
chip antibody
MED1 (M-255, sc-8998, Santa Cruz)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
22997816
Reads aligned (%)
69.7
Duplicates removed (%)
28.6
Number of peaks
4599 (qval < 1E-05)

hg38

Number of total reads
22997816
Reads aligned (%)
72.4
Duplicates removed (%)
26.6
Number of peaks
4662 (qval < 1E-05)

Base call quality data from DBCLS SRA