SRX3942557
GSM3099658: F3 DMSO H3K27me3; Caenorhabditis elegans; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Adult
Cell type
Adult
NA
NA

Attributes by original data submitter

Sample

source_name
Whole body adult stage
treatment
DMSO 0.1%
antibody
H3K27me3

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Lysates were obtained from worm body and histone-DNA complexes were isolated with antibody. Libraries were prepared by Active Motif service

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
17425224
Reads aligned (%)
92.1
Duplicates removed (%)
22.6
Number of peaks
3440 (qval < 1E-05)

ce10

Number of total reads
17425224
Reads aligned (%)
92.1
Duplicates removed (%)
22.6
Number of peaks
3440 (qval < 1E-05)

Base call quality data from DBCLS SRA