Curated Sample Data


Genome
dm3
Antigen Class
Input control
Antigen
Input control
Cell type Class
Adult
Cell type
Adult head

Cell type information


NA
NA

Attributes by Original Data Submitter


source_name
fly head
tissue
head
age
3 days
genotype
5905
chip antibody
N/A

Metadata from Sequence Read Archive

Library Description


library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
For ChIP-Seq, 5% mouse epigenome was used as internal control for H3K27me3 IP. ChIP libraries were prepared according to instructions of NEB DNA library prep kit (NEB, E7370L). RNA libraries were prepared according to instructions of NEB Ultra RNA library prep kit (NEB, E7530L).

Platform Information


instrument_model
Illumina MiSeq

External Database Query

Logs in read processing pipeline


Number of total reads
2837414
Reads aligned (%)
80.8
Duplicates removed (%)
4.6
Number of peaks
659 (qval < 1E-05)

Sequence Quality Data from DBCLS SRA