Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Digestive tract
Cell type
AGS
Primary Tissue
Stomach
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

source_name
AGS
cell line
AGS
cell type
gastric cancer cell line
genotype/variation
ONECUT2 overexpression

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
52892849
Reads aligned (%)
96.5
Duplicates removed (%)
3.3
Number of peaks
1138 (qval < 1E-05)

hg19

Number of total reads
52892849
Reads aligned (%)
95.8
Duplicates removed (%)
4.3
Number of peaks
1018 (qval < 1E-05)

Base call quality data from DBCLS SRA