Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Blood

Cell type

Hematopoietic Stem Cells

MeSH Description

Progenitor cells from which all blood cells derived. They are found primarily in the bone marrow and also in small numbers in the peripheral blood.

Sample

source_name

Mouse HPCs

tissue

Hematopoietic System

antibody

IgG

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Fix 1% paraformaldehyde, nuclear purification with 0.5% NP40, DNA solubilization and sonication in 1% SDS followed by Co-IP with antibody of interest Illumina Truseq LT

Sequencing Platform

instrument_model

Illumina HiSeq 2500

mm10

Number of total reads

18705559

Reads aligned (%)

2.8

Duplicates removed (%)

69.0

Number of peaks

21 (qval < 1E-05)

mm9

Number of total reads

18705559

Reads aligned (%)

2.8

Duplicates removed (%)

69.6

Number of peaks

20 (qval < 1E-05)