Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Blood

Cell type

Natural Killer T-Cells

MeSH Description

A specific natural killer T-cell subtype that expresses an invariant T-cell receptor alpha-chain.

Sample

source_name

CD56Bright natural killer cells

cell type

CD56Bright natural killer cells

individual

Donor 3

antibody

none

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Lysates were clarified from MNase treated nuclei and histone-DNA complexes were isolated with antibody. ATAC-seq were processed as per manufacturers instructions (Illumina FC-121-1030)

Sequencing Platform

instrument_model

Illumina HiSeq 2500

hg38

Number of total reads

37733636

Reads aligned (%)

98.8

Duplicates removed (%)

4.5

Number of peaks

713 (qval < 1E-05)

hg19

Number of total reads

37733636

Reads aligned (%)

98.0

Duplicates removed (%)

6.2

Number of peaks

702 (qval < 1E-05)