Antigen

Antigen Class

Histone

Antigen

H3K27ac

Cell type

Cell type Class

Blood

Cell type

Natural Killer T-Cells

MeSH Description

A specific natural killer T-cell subtype that expresses an invariant T-cell receptor alpha-chain.

Sample

source_name

CD56Dim natural killer cells

cell type

CD56Dim natural killer cells

individual

Donor 3

antibody

H3K27ac (abcam 4729)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Lysates were clarified from MNase treated nuclei and histone-DNA complexes were isolated with antibody. ATAC-seq were processed as per manufacturers instructions (Illumina FC-121-1030)

Sequencing Platform

instrument_model

Illumina HiSeq 2500

hg38

Number of total reads

30494101

Reads aligned (%)

99.2

Duplicates removed (%)

14.2

Number of peaks

29242 (qval < 1E-05)

hg19

Number of total reads

30494101

Reads aligned (%)

98.9

Duplicates removed (%)

14.7

Number of peaks

29251 (qval < 1E-05)