Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Pancreas

Cell type

EndoC-BH1

NA

NA

Sample

source_name

EndoC βH1

cell line

EndoC BetaH1

cell type

Pancreatic Beta cells

chip antibody

none

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

The chromatin immune-precipitation was performed with 50,000 EndoC-βH1 cells using True MicroChIP Kit Kit (Diagenode Cat. # C01010130). The sequencing library was generated using MicroPlex Library Preparation Kit v2 (Diagenode Cat. # C05010012) on an IP-Star® Compact Automated System (Diagenode Cat. # B03000002)

Sequencing Platform

instrument_model

Illumina HiSeq 2500

hg38

Number of total reads

68095118

Reads aligned (%)

98.3

Duplicates removed (%)

5.1

Number of peaks

2010 (qval < 1E-05)

hg19

Number of total reads

68095118

Reads aligned (%)

97.2

Duplicates removed (%)

6.4

Number of peaks

1551 (qval < 1E-05)