Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Liver

Cell type

Liver

MeSH Description

A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Sample

source_name

normal liver

sample id

756

tissue

liver

disease state

normal

chip antibody

none

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Mnase digested nucleosomes libraries were constructed according to illumina's instructions

Sequencing Platform

instrument_model

Illumina HiSeq 2500

hg38

Number of total reads

50273658

Reads aligned (%)

98.7

Duplicates removed (%)

6.0

Number of peaks

634 (qval < 1E-05)

hg19

Number of total reads

50273658

Reads aligned (%)

97.6

Duplicates removed (%)

6.4

Number of peaks

494 (qval < 1E-05)