Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Embryonic fibroblast

Cell type

MEF

Tissue

Embryonic Fibroblast

Lineage

primaryCells

Description

Mouse Embryonic Fibroblast

Sample

source_name

E13.5 MEF

developmental stage

E13.5

cell type

mouse embryonic fibroblasts

genotype

Smchd1 MD1/MD1

strain

C57BL6/J

Sex

female

chip antibody

none

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIP was performed as described by Nozawa et al., (2013) ChIP-seq libraries were prepared as described by Nozawa et al., (2013)

Sequencing Platform

instrument_model

Illumina Genome Analyzer IIx

mm10

Number of total reads

42325094

Reads aligned (%)

98.7

Duplicates removed (%)

20.8

Number of peaks

539 (qval < 1E-05)

mm9

Number of total reads

42325094

Reads aligned (%)

98.4

Duplicates removed (%)

20.7

Number of peaks

672 (qval < 1E-05)