Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Neural
Cell type
Neurons
MeSH Description
The basic cellular units of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the NERVOUS SYSTEM.

Attributes by original data submitter

Sample

source_name
Primary Culture Mouse Neurons
mouse strain
CD1
time point
360
drug
DMSO
chip antibody
anti-RNAPol2, abcam, ab817

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
20400232
Reads aligned (%)
89.7
Duplicates removed (%)
23.1
Number of peaks
4903 (qval < 1E-05)

mm9

Number of total reads
20400232
Reads aligned (%)
89.5
Duplicates removed (%)
23.2
Number of peaks
4889 (qval < 1E-05)

Base call quality data from DBCLS SRA