Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
MLLT3

Cell type

Cell type Class
Blood
Cell type
Erythroblasts
MeSH Description
Immature, nucleated ERYTHROCYTES occupying the stage of ERYTHROPOIESIS that follows formation of ERYTHROID PRECURSOR CELLS and precedes formation of RETICULOCYTES. The normal series is called normoblasts. Cells called MEGALOBLASTS are a pathologic series of erythroblasts.

Attributes by original data submitter

Sample

source_name
human FL CD34-CD71+CD235a+
cell type
FL-Erythroblasts
chip antibody
Genetex, GTX102835

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Cells are crosslinked 10' in 1%formaldehide, lysed and sonicated. The indicated mark is immunoprecipitated overnaight, and enriched by magnetical isolation. IP fraction is eluted and decrosslinked. Ovation Ultralow v2 (Nugen)

Sequencing Platform

instrument_model
Illumina HiSeq 4000

hg19

Number of total reads
12912506
Reads aligned (%)
45.8
Duplicates removed (%)
38.0
Number of peaks
566 (qval < 1E-05)

hg38

Number of total reads
12912506
Reads aligned (%)
47.2
Duplicates removed (%)
36.7
Number of peaks
163 (qval < 1E-05)

Base call quality data from DBCLS SRA