Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
RUNX1

Cell type

Cell type Class
Adipocyte
Cell type
LPS141
NA
NA

Attributes by original data submitter

Sample

source_name
LPS141
cell type
liposarcoma cells
chip antibody
pan-RUNX (Abcam, #ab92336)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
45047412
Reads aligned (%)
98.4
Duplicates removed (%)
24.1
Number of peaks
1930 (qval < 1E-05)

hg19

Number of total reads
45047412
Reads aligned (%)
97.6
Duplicates removed (%)
25.4
Number of peaks
1918 (qval < 1E-05)

Base call quality data from DBCLS SRA