Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ESR1

Cell type

Cell type Class
Others
Cell type
Tumour tissues
NA
NA

Attributes by original data submitter

Sample

source_name
Human tumour tissue
condition
Metastasis
tissue
Met_T3
antibody
anti-ER (SC-543, Santa Cruz Biotechnologies)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
21176171
Reads aligned (%)
81.7
Duplicates removed (%)
18.1
Number of peaks
57550 (qval < 1E-05)

hg38

Number of total reads
21176171
Reads aligned (%)
81.9
Duplicates removed (%)
17.9
Number of peaks
56242 (qval < 1E-05)

Base call quality data from DBCLS SRA