Antigen

Antigen Class

DNase-seq

Antigen

DNase-Seq

Cell type

Cell type Class

Blood

Cell type

REH

Primary Tissue

Blood

Tissue Diagnosis

Leukemia Acute Lymphocytic

Sample

source_name

Pro-B lymphoblastic leukemia cell line

cell line

Reh

lymphoma type

non-Hodgkin's Lymphoma cell line

passages

7

dnasei origin

Worthington

Sequenced DNA Library

library_strategy

DNase-Hypersensitivity

library_source

GENOMIC

library_selection

DNase

library_construction_protocol

DNaseI-Seq samples were generated from a size selection of DNaseI-digested DNA fragments comprised within a range of 100 to 600 bp and subjected to library preparation as per manufacturer´s instruction (Illumina)

Sequencing Platform

instrument_model

Illumina Genome Analyzer IIx

hg38

Number of total reads

18315561

Reads aligned (%)

78.4

Duplicates removed (%)

12.6

Number of peaks

7195 (qval < 1E-05)

hg19

Number of total reads

18315561

Reads aligned (%)

77.7

Duplicates removed (%)

13.9

Number of peaks

7047 (qval < 1E-05)