Antigen

Antigen Class

TFs and others

Antigen

KLF5

Cell type

Cell type Class

Digestive tract

Cell type

AGS

Primary Tissue

Stomach

Tissue Diagnosis

Adenocarcinoma

Sample

source_name

AGS KLF5

cell line

AGS

cell type

gastric cancer

chip antibody

sc-22797

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Chromatin extracts containing DNA fragments with an average size of 500 bp were immunoprecipitated using the antibodies ChIP-seq libraries were constructed using a ChIP-Seq sample prep kit (IP-102-1001, Illumina) and sequenced on a Genome Analyzer IIx instrument (Illumina)

Sequencing Platform

instrument_model

Illumina Genome Analyzer IIx

hg38

Number of total reads

39470351

Reads aligned (%)

44.2

Duplicates removed (%)

11.5

Number of peaks

978 (qval < 1E-05)

hg19

Number of total reads

39470351

Reads aligned (%)

43.7

Duplicates removed (%)

12.9

Number of peaks

1188 (qval < 1E-05)